Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra3O35118 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra3O35118 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gfra3O35118 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra3O35118 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra3O35118 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra3O35118 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra3O35118 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gfra3O35118 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Gfra3O35118 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gfra3O35118 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gfra3O35118 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.6■□□□□ 0.73
Gfra3O35118 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra3O35118 Gm27502-201ENSMUST00000183495 199 ntBASIC19.6■□□□□ 0.73
Gfra3O35118 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra3O35118 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gfra3O35118 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra3O35118 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra3O35118 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra3O35118 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra3O35118 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gfra3O35118 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gfra3O35118 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gfra3O35118 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra3O35118 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.58■□□□□ 0.72
Gfra3O35118 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra3O35118 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.58■□□□□ 0.72
Gfra3O35118 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra3O35118 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra3O35118 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gfra3O35118 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra3O35118 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra3O35118 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.57■□□□□ 0.72
Gfra3O35118 Gm12366-201ENSMUST00000121722 873 ntBASIC19.57■□□□□ 0.72
Gfra3O35118 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.57■□□□□ 0.72
Gfra3O35118 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.57■□□□□ 0.72
Gfra3O35118 Gm5786-201ENSMUST00000085368 882 ntBASIC19.57■□□□□ 0.72
Gfra3O35118 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra3O35118 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gfra3O35118 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gfra3O35118 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gfra3O35118 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gfra3O35118 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.56■□□□□ 0.72
Gfra3O35118 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gfra3O35118 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Gfra3O35118 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Gfra3O35118 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra3O35118 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.55■□□□□ 0.72
Gfra3O35118 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra3O35118 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra3O35118 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gfra3O35118 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gfra3O35118 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.54■□□□□ 0.72
Gfra3O35118 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gfra3O35118 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra3O35118 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.53■□□□□ 0.72
Gfra3O35118 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra3O35118 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gfra3O35118 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gfra3O35118 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gfra3O35118 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gfra3O35118 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gfra3O35118 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.52■□□□□ 0.72
Gfra3O35118 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gfra3O35118 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.51■□□□□ 0.71
Gfra3O35118 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.51■□□□□ 0.71
Gfra3O35118 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Gfra3O35118 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gfra3O35118 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.5■□□□□ 0.71
Gfra3O35118 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra3O35118 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra3O35118 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra3O35118 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra3O35118 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gfra3O35118 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra3O35118 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Gfra3O35118 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra3O35118 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra3O35118 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gfra3O35118 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gfra3O35118 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gfra3O35118 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.48■□□□□ 0.71
Gfra3O35118 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gfra3O35118 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Gfra3O35118 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfra3O35118 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfra3O35118 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Gfra3O35118 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfra3O35118 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfra3O35118 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfra3O35118 Gm14523-201ENSMUST00000117260 558 ntBASIC19.46■□□□□ 0.71
Gfra3O35118 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.46■□□□□ 0.71
Gfra3O35118 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.46■□□□□ 0.71
Gfra3O35118 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.46■□□□□ 0.71
Gfra3O35118 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms