Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trav13d-3J3QMG8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav13d-3J3QMG8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13d-3J3QMG8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13d-3J3QMG8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav13d-3J3QMG8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trav13d-3J3QMG8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav13d-3J3QMG8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Mir3960-201ENSMUST00000198213 73 ntBASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav13d-3J3QMG8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13d-3J3QMG8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13d-3J3QMG8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13d-3J3QMG8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav13d-3J3QMG8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav13d-3J3QMG8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav13d-3J3QMG8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trav13d-3J3QMG8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.96■□□□□ 0.79
Trav13d-3J3QMG8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.96■□□□□ 0.79
Trav13d-3J3QMG8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trav13d-3J3QMG8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav13d-3J3QMG8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav13d-3J3QMG8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trav13d-3J3QMG8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav13d-3J3QMG8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.94■□□□□ 0.78
Trav13d-3J3QMG8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13d-3J3QMG8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Trav13d-3J3QMG8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13d-3J3QMG8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13d-3J3QMG8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav13d-3J3QMG8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.92■□□□□ 0.78
Trav13d-3J3QMG8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trav13d-3J3QMG8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav13d-3J3QMG8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav13d-3J3QMG8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.92■□□□□ 0.78
Trav13d-3J3QMG8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav13d-3J3QMG8 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.9■□□□□ 0.78
Trav13d-3J3QMG8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav13d-3J3QMG8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav13d-3J3QMG8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav13d-3J3QMG8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trav13d-3J3QMG8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.88■□□□□ 0.77
Trav13d-3J3QMG8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13d-3J3QMG8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13d-3J3QMG8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13d-3J3QMG8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav13d-3J3QMG8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav13d-3J3QMG8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav13d-3J3QMG8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav13d-3J3QMG8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav13d-3J3QMG8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.82■□□□□ 0.76
Trav13d-3J3QMG8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms