Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Gm8503-201ENSMUST00000118131 455 ntBASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc179J3QM76 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc179J3QM76 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc179J3QM76 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc179J3QM76 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc179J3QM76 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc179J3QM76 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc179J3QM76 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc179J3QM76 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc179J3QM76 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc179J3QM76 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc179J3QM76 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc179J3QM76 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc179J3QM76 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc179J3QM76 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc179J3QM76 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc179J3QM76 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc179J3QM76 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc179J3QM76 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc179J3QM76 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc179J3QM76 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc179J3QM76 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc179J3QM76 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc179J3QM76 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc179J3QM76 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc179J3QM76 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc179J3QM76 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.2□□□□□ -0.14
Ccdc179J3QM76 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.2□□□□□ -0.14
Ccdc179J3QM76 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc179J3QM76 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc179J3QM76 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc179J3QM76 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc179J3QM76 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc179J3QM76 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc179J3QM76 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc179J3QM76 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc179J3QM76 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc179J3QM76 Gm7432-201ENSMUST00000210343 879 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms