Protein–RNA interactions for Protein: F6RFI0

Gm9887, Predicted gene 9887, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9887F6RFI0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm9887F6RFI0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm9887F6RFI0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm9887F6RFI0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9887F6RFI0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9887F6RFI0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm9887F6RFI0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.14■□□□□ 0.17
Gm9887F6RFI0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.14■□□□□ 0.17
Gm9887F6RFI0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm9887F6RFI0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9887F6RFI0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9887F6RFI0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm9887F6RFI0 Gm7432-201ENSMUST00000210343 879 ntBASIC16.13■□□□□ 0.17
Gm9887F6RFI0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm9887F6RFI0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gm9887F6RFI0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm9887F6RFI0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm9887F6RFI0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9887F6RFI0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm9887F6RFI0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm9887F6RFI0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm9887F6RFI0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm9887F6RFI0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm9887F6RFI0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9887F6RFI0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm9887F6RFI0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9887F6RFI0 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.07■□□□□ 0.16
Gm9887F6RFI0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9887F6RFI0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9887F6RFI0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9887F6RFI0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm9887F6RFI0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm9887F6RFI0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm9887F6RFI0 Gm11599-201ENSMUST00000118720 878 ntBASIC16.06■□□□□ 0.16
Gm9887F6RFI0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm9887F6RFI0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm9887F6RFI0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm9887F6RFI0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm9887F6RFI0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm9887F6RFI0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm9887F6RFI0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm9887F6RFI0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm9887F6RFI0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm9887F6RFI0 Gm4799-201ENSMUST00000095396 657 ntBASIC16.03■□□□□ 0.16
Gm9887F6RFI0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Gm9887F6RFI0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm9887F6RFI0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm9887F6RFI0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm9887F6RFI0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm9887F6RFI0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.02■□□□□ 0.16
Gm9887F6RFI0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm9887F6RFI0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Gm9887F6RFI0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm9887F6RFI0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Gm9887F6RFI0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Gm9887F6RFI0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16■□□□□ 0.15
Gm9887F6RFI0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Gm9887F6RFI0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Gm9887F6RFI0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16■□□□□ 0.15
Gm9887F6RFI0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Gm9887F6RFI0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms