Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptbn4E9PX29 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptbn4E9PX29 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptbn4E9PX29 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptbn4E9PX29 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sptbn4E9PX29 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn4E9PX29 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.35■■□□□ 1.01
Sptbn4E9PX29 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.35■■□□□ 1.01
Sptbn4E9PX29 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.35■■□□□ 1.01
Sptbn4E9PX29 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn4E9PX29 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptbn4E9PX29 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.33■■□□□ 1.01
Sptbn4E9PX29 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Sptbn4E9PX29 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptbn4E9PX29 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sptbn4E9PX29 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptbn4E9PX29 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.32■■□□□ 1
Sptbn4E9PX29 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sptbn4E9PX29 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sptbn4E9PX29 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sptbn4E9PX29 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sptbn4E9PX29 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sptbn4E9PX29 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sptbn4E9PX29 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sptbn4E9PX29 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.3■■□□□ 1
Sptbn4E9PX29 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptbn4E9PX29 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.3■■□□□ 1
Sptbn4E9PX29 Gm10232-201ENSMUST00000089221 720 ntBASIC21.3■■□□□ 1
Sptbn4E9PX29 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.29■■□□□ 1
Sptbn4E9PX29 Etf1-202ENSMUST00000180351 108 ntBASIC21.29■■□□□ 1
Sptbn4E9PX29 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sptbn4E9PX29 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.29■■□□□ 1
Sptbn4E9PX29 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptbn4E9PX29 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptbn4E9PX29 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptbn4E9PX29 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.27■■□□□ 1
Sptbn4E9PX29 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Sptbn4E9PX29 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sptbn4E9PX29 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn4E9PX29 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn4E9PX29 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn4E9PX29 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
Sptbn4E9PX29 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sptbn4E9PX29 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.26■□□□□ 0.99
Sptbn4E9PX29 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn4E9PX29 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.24■□□□□ 0.99
Sptbn4E9PX29 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptbn4E9PX29 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn4E9PX29 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.24■□□□□ 0.99
Sptbn4E9PX29 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn4E9PX29 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sptbn4E9PX29 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sptbn4E9PX29 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sptbn4E9PX29 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sptbn4E9PX29 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptbn4E9PX29 Terc-201ENSMUST00000082862 423 ntBASIC21.22■□□□□ 0.99
Sptbn4E9PX29 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptbn4E9PX29 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.21■□□□□ 0.99
Sptbn4E9PX29 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sptbn4E9PX29 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptbn4E9PX29 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Sptbn4E9PX29 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptbn4E9PX29 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sptbn4E9PX29 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sptbn4E9PX29 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn4E9PX29 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn4E9PX29 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.18■□□□□ 0.98
Sptbn4E9PX29 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.18■□□□□ 0.98
Sptbn4E9PX29 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.18■□□□□ 0.98
Sptbn4E9PX29 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptbn4E9PX29 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.18■□□□□ 0.98
Sptbn4E9PX29 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.17■□□□□ 0.98
Sptbn4E9PX29 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptbn4E9PX29 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sptbn4E9PX29 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptbn4E9PX29 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.17■□□□□ 0.98
Sptbn4E9PX29 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Sptbn4E9PX29 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn4E9PX29 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn4E9PX29 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn4E9PX29 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.15■□□□□ 0.98
Sptbn4E9PX29 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn4E9PX29 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sptbn4E9PX29 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Sptbn4E9PX29 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.13■□□□□ 0.97
Sptbn4E9PX29 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.13■□□□□ 0.97
Sptbn4E9PX29 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn4E9PX29 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sptbn4E9PX29 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms