Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.61■□□□□ 0.89
Shank1D3YZU1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Shank1D3YZU1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank1D3YZU1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.6■□□□□ 0.89
Shank1D3YZU1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.6■□□□□ 0.89
Shank1D3YZU1 Rps24-207ENSMUST00000224568 714 ntBASIC20.6■□□□□ 0.89
Shank1D3YZU1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shank1D3YZU1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shank1D3YZU1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank1D3YZU1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shank1D3YZU1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shank1D3YZU1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shank1D3YZU1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shank1D3YZU1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shank1D3YZU1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank1D3YZU1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank1D3YZU1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank1D3YZU1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shank1D3YZU1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank1D3YZU1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Shank1D3YZU1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shank1D3YZU1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.56■□□□□ 0.88
Shank1D3YZU1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.56■□□□□ 0.88
Shank1D3YZU1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank1D3YZU1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Shank1D3YZU1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.55■□□□□ 0.88
Shank1D3YZU1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shank1D3YZU1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shank1D3YZU1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shank1D3YZU1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Shank1D3YZU1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.53■□□□□ 0.88
Shank1D3YZU1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Shank1D3YZU1 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.53■□□□□ 0.88
Shank1D3YZU1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shank1D3YZU1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shank1D3YZU1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank1D3YZU1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.52■□□□□ 0.88
Shank1D3YZU1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.52■□□□□ 0.88
Shank1D3YZU1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.52■□□□□ 0.88
Shank1D3YZU1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.52■□□□□ 0.88
Shank1D3YZU1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank1D3YZU1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shank1D3YZU1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shank1D3YZU1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.52■□□□□ 0.88
Shank1D3YZU1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank1D3YZU1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.51■□□□□ 0.87
Shank1D3YZU1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank1D3YZU1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Shank1D3YZU1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.51■□□□□ 0.87
Shank1D3YZU1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shank1D3YZU1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shank1D3YZU1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shank1D3YZU1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.5■□□□□ 0.87
Shank1D3YZU1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank1D3YZU1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Shank1D3YZU1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank1D3YZU1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shank1D3YZU1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Shank1D3YZU1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Shank1D3YZU1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shank1D3YZU1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shank1D3YZU1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank1D3YZU1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shank1D3YZU1 Zxda-201ENSMUST00000117281 2621 ntBASIC20.45■□□□□ 0.87
Shank1D3YZU1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank1D3YZU1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank1D3YZU1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shank1D3YZU1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.45■□□□□ 0.86
Shank1D3YZU1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shank1D3YZU1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank1D3YZU1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shank1D3YZU1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.44■□□□□ 0.86
Shank1D3YZU1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Shank1D3YZU1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shank1D3YZU1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank1D3YZU1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shank1D3YZU1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shank1D3YZU1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.42■□□□□ 0.86
Shank1D3YZU1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.42■□□□□ 0.86
Shank1D3YZU1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shank1D3YZU1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.42■□□□□ 0.86
Shank1D3YZU1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Shank1D3YZU1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.41■□□□□ 0.86
Shank1D3YZU1 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.41■□□□□ 0.86
Shank1D3YZU1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shank1D3YZU1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shank1D3YZU1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Shank1D3YZU1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Shank1D3YZU1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shank1D3YZU1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.39■□□□□ 0.85
Shank1D3YZU1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Shank1D3YZU1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Shank1D3YZU1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms