Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv29A0A0G2LB96 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.86■□□□□ 0.61
Trbv29A0A0G2LB96 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv29A0A0G2LB96 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trbv29A0A0G2LB96 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv29A0A0G2LB96 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv29A0A0G2LB96 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv29A0A0G2LB96 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Trbv29A0A0G2LB96 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv29A0A0G2LB96 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv29A0A0G2LB96 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.84■□□□□ 0.61
Trbv29A0A0G2LB96 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv29A0A0G2LB96 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv29A0A0G2LB96 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv29A0A0G2LB96 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv29A0A0G2LB96 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv29A0A0G2LB96 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv29A0A0G2LB96 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv29A0A0G2LB96 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trbv29A0A0G2LB96 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trbv29A0A0G2LB96 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv29A0A0G2LB96 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.81■□□□□ 0.6
Trbv29A0A0G2LB96 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv29A0A0G2LB96 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trbv29A0A0G2LB96 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv29A0A0G2LB96 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trbv29A0A0G2LB96 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Trbv29A0A0G2LB96 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbv29A0A0G2LB96 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv29A0A0G2LB96 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv29A0A0G2LB96 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv29A0A0G2LB96 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.78■□□□□ 0.6
Trbv29A0A0G2LB96 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv29A0A0G2LB96 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv29A0A0G2LB96 Gm37136-201ENSMUST00000194368 194 ntBASIC18.77■□□□□ 0.6
Trbv29A0A0G2LB96 Nkain2-201ENSMUST00000092602 558 ntBASIC18.77■□□□□ 0.6
Trbv29A0A0G2LB96 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv29A0A0G2LB96 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv29A0A0G2LB96 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv29A0A0G2LB96 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.76■□□□□ 0.59
Trbv29A0A0G2LB96 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv29A0A0G2LB96 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv29A0A0G2LB96 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv29A0A0G2LB96 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv29A0A0G2LB96 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv29A0A0G2LB96 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv29A0A0G2LB96 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.74■□□□□ 0.59
Trbv29A0A0G2LB96 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv29A0A0G2LB96 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv29A0A0G2LB96 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trbv29A0A0G2LB96 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv29A0A0G2LB96 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv29A0A0G2LB96 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv29A0A0G2LB96 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv29A0A0G2LB96 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.71■□□□□ 0.58
Trbv29A0A0G2LB96 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv29A0A0G2LB96 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv29A0A0G2LB96 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv29A0A0G2LB96 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv29A0A0G2LB96 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv29A0A0G2LB96 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv29A0A0G2LB96 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv29A0A0G2LB96 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.66■□□□□ 0.58
Trbv29A0A0G2LB96 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms