Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.91■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.88■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6821-201ENSMUST00000107540 542 ntBASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.76■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.75■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.74■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8503-201ENSMUST00000118131 455 ntBASIC19.73■□□□□ 0.75
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms