Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv19A0A0B4J1H4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv19A0A0B4J1H4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv19A0A0B4J1H4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv19A0A0B4J1H4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv19A0A0B4J1H4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv19A0A0B4J1H4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trbv19A0A0B4J1H4 Gm8503-201ENSMUST00000118131 455 ntBASIC18.15■□□□□ 0.5
Trbv19A0A0B4J1H4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.14■□□□□ 0.49
Trbv19A0A0B4J1H4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv19A0A0B4J1H4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv19A0A0B4J1H4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv19A0A0B4J1H4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv19A0A0B4J1H4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv19A0A0B4J1H4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv19A0A0B4J1H4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv19A0A0B4J1H4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv19A0A0B4J1H4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv19A0A0B4J1H4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv19A0A0B4J1H4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv19A0A0B4J1H4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.08■□□□□ 0.48
Trbv19A0A0B4J1H4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv19A0A0B4J1H4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
Trbv19A0A0B4J1H4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trbv19A0A0B4J1H4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv19A0A0B4J1H4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv19A0A0B4J1H4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trbv19A0A0B4J1H4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv19A0A0B4J1H4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.05■□□□□ 0.48
Trbv19A0A0B4J1H4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv19A0A0B4J1H4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trbv19A0A0B4J1H4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv19A0A0B4J1H4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv19A0A0B4J1H4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv19A0A0B4J1H4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv19A0A0B4J1H4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trbv19A0A0B4J1H4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv19A0A0B4J1H4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Trbv19A0A0B4J1H4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv19A0A0B4J1H4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trbv19A0A0B4J1H4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv19A0A0B4J1H4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trbv19A0A0B4J1H4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv19A0A0B4J1H4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms