Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv12-2A0A0B4J1H1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv12-2A0A0B4J1H1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv12-2A0A0B4J1H1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.98■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-2A0A0B4J1H1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.94■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trbv12-2A0A0B4J1H1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.94■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-2A0A0B4J1H1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.92■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-2A0A0B4J1H1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.91■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trbv12-2A0A0B4J1H1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-2A0A0B4J1H1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trbv12-2A0A0B4J1H1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trbv12-2A0A0B4J1H1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv12-2A0A0B4J1H1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trbv12-2A0A0B4J1H1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms