Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-3A0A075B6A4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-3A0A075B6A4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-3A0A075B6A4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav12d-3A0A075B6A4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-3A0A075B6A4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-3A0A075B6A4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-3A0A075B6A4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-3A0A075B6A4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-3A0A075B6A4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav12d-3A0A075B6A4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-3A0A075B6A4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trav12d-3A0A075B6A4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav12d-3A0A075B6A4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-3A0A075B6A4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-3A0A075B6A4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-3A0A075B6A4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-3A0A075B6A4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-3A0A075B6A4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav12d-3A0A075B6A4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-3A0A075B6A4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav12d-3A0A075B6A4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav12d-3A0A075B6A4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-3A0A075B6A4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-3A0A075B6A4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-3A0A075B6A4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-3A0A075B6A4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav12d-3A0A075B6A4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav12d-3A0A075B6A4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12d-3A0A075B6A4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav12d-3A0A075B6A4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-3A0A075B6A4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12d-3A0A075B6A4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav12d-3A0A075B6A4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav12d-3A0A075B6A4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12d-3A0A075B6A4 Peli2-204ENSMUST00000226513 1320 ntBASIC17.01■□□□□ 0.31
Trav12d-3A0A075B6A4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-3A0A075B6A4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-3A0A075B6A4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12d-3A0A075B6A4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12d-3A0A075B6A4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav12d-3A0A075B6A4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12d-3A0A075B6A4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav12d-3A0A075B6A4 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.99■□□□□ 0.31
Trav12d-3A0A075B6A4 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.99■□□□□ 0.31
Trav12d-3A0A075B6A4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12d-3A0A075B6A4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-3A0A075B6A4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Trav12d-3A0A075B6A4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-3A0A075B6A4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12d-3A0A075B6A4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Particl-201ENSMUST00000205370 1560 ntBASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav12d-3A0A075B6A4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav12d-3A0A075B6A4 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12d-3A0A075B6A4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms