Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6-7-dv9A0A075B639 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6-7-dv9A0A075B639 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6-7-dv9A0A075B639 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav6-7-dv9A0A075B639 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6-7-dv9A0A075B639 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6-7-dv9A0A075B639 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6-7-dv9A0A075B639 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6-7-dv9A0A075B639 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6-7-dv9A0A075B639 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.09■□□□□ 0.81
Trav6-7-dv9A0A075B639 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6-7-dv9A0A075B639 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.07■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav6-7-dv9A0A075B639 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.07■□□□□ 0.8
Trav6-7-dv9A0A075B639 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm7432-201ENSMUST00000210343 879 ntBASIC20.06■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6-7-dv9A0A075B639 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.06■□□□□ 0.8
Trav6-7-dv9A0A075B639 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6-7-dv9A0A075B639 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.05■□□□□ 0.8
Trav6-7-dv9A0A075B639 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6-7-dv9A0A075B639 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.04■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gm4799-201ENSMUST00000095396 657 ntBASIC20.04■□□□□ 0.8
Trav6-7-dv9A0A075B639 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6-7-dv9A0A075B639 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6-7-dv9A0A075B639 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-7-dv9A0A075B639 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-7-dv9A0A075B639 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-7-dv9A0A075B639 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-7-dv9A0A075B639 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav6-7-dv9A0A075B639 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Trav6-7-dv9A0A075B639 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav6-7-dv9A0A075B639 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6-7-dv9A0A075B639 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6-7-dv9A0A075B639 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6-7-dv9A0A075B639 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6-7-dv9A0A075B639 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav6-7-dv9A0A075B639 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav6-7-dv9A0A075B639 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav6-7-dv9A0A075B639 Gm11599-201ENSMUST00000118720 878 ntBASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trav6-7-dv9A0A075B639 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-7-dv9A0A075B639 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-7-dv9A0A075B639 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-7-dv9A0A075B639 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-7-dv9A0A075B639 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trav6-7-dv9A0A075B639 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6-7-dv9A0A075B639 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav6-7-dv9A0A075B639 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6-7-dv9A0A075B639 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6-7-dv9A0A075B639 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6-7-dv9A0A075B639 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trav6-7-dv9A0A075B639 Mir3960-201ENSMUST00000198213 73 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms