Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4n-4A0A075B615 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4n-4A0A075B615 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4n-4A0A075B615 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav4n-4A0A075B615 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4n-4A0A075B615 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4n-4A0A075B615 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav4n-4A0A075B615 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4n-4A0A075B615 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.85■□□□□ 0.13
Trav4n-4A0A075B615 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav4n-4A0A075B615 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4n-4A0A075B615 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav4n-4A0A075B615 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav4n-4A0A075B615 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav4n-4A0A075B615 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4n-4A0A075B615 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4n-4A0A075B615 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav4n-4A0A075B615 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav4n-4A0A075B615 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav4n-4A0A075B615 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav4n-4A0A075B615 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav4n-4A0A075B615 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav4n-4A0A075B615 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4n-4A0A075B615 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav4n-4A0A075B615 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.79■□□□□ 0.12
Trav4n-4A0A075B615 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4n-4A0A075B615 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4n-4A0A075B615 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Trav4n-4A0A075B615 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav4n-4A0A075B615 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4n-4A0A075B615 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav4n-4A0A075B615 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav4n-4A0A075B615 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav4n-4A0A075B615 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav4n-4A0A075B615 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav4n-4A0A075B615 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4n-4A0A075B615 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4n-4A0A075B615 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav4n-4A0A075B615 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4n-4A0A075B615 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav4n-4A0A075B615 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav4n-4A0A075B615 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms