Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-6A0A075B603 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-6A0A075B603 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-6A0A075B603 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-6A0A075B603 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-6A0A075B603 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav6-6A0A075B603 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6-6A0A075B603 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.85■□□□□ 0.29
Trav6-6A0A075B603 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-6A0A075B603 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-6A0A075B603 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-6A0A075B603 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-6A0A075B603 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-6A0A075B603 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-6A0A075B603 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-6A0A075B603 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-6A0A075B603 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-6A0A075B603 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-6A0A075B603 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-6A0A075B603 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6-6A0A075B603 Notumos-201ENSMUST00000151998 2659 ntBASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6-6A0A075B603 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6-6A0A075B603 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav6-6A0A075B603 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-6A0A075B603 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-6A0A075B603 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6-6A0A075B603 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-6A0A075B603 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-6A0A075B603 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-6A0A075B603 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6-6A0A075B603 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav6-6A0A075B603 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6-6A0A075B603 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6-6A0A075B603 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trav6-6A0A075B603 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6-6A0A075B603 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms