Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.66■□□□□ 0.42
Trav9-1A0A075B601 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-1A0A075B601 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-1A0A075B601 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-1A0A075B601 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-1A0A075B601 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-1A0A075B601 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav9-1A0A075B601 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav9-1A0A075B601 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav9-1A0A075B601 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9-1A0A075B601 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav9-1A0A075B601 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Gm37136-201ENSMUST00000194368 194 ntBASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9-1A0A075B601 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav9-1A0A075B601 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9-1A0A075B601 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9-1A0A075B601 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9-1A0A075B601 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav9-1A0A075B601 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.61■□□□□ 0.41
Trav9-1A0A075B601 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9-1A0A075B601 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-1A0A075B601 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-1A0A075B601 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-1A0A075B601 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-1A0A075B601 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9-1A0A075B601 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9-1A0A075B601 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9-1A0A075B601 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9-1A0A075B601 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9-1A0A075B601 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9-1A0A075B601 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-1A0A075B601 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-1A0A075B601 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-1A0A075B601 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-1A0A075B601 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.55■□□□□ 0.4
Trav9-1A0A075B601 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-1A0A075B601 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-1A0A075B601 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav9-1A0A075B601 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-1A0A075B601 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9-1A0A075B601 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9-1A0A075B601 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-1A0A075B601 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms