Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-53A0A075B5W3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-53A0A075B5W3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-53A0A075B5W3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-53A0A075B5W3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-53A0A075B5W3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv1-53A0A075B5W3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-53A0A075B5W3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.08■□□□□ 0.33
Ighv1-53A0A075B5W3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ighv1-53A0A075B5W3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-53A0A075B5W3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-53A0A075B5W3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-53A0A075B5W3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-53A0A075B5W3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-53A0A075B5W3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Gm8503-201ENSMUST00000118131 455 ntBASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-53A0A075B5W3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-53A0A075B5W3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-53A0A075B5W3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-53A0A075B5W3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-53A0A075B5W3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-53A0A075B5W3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-53A0A075B5W3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-53A0A075B5W3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-53A0A075B5W3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-53A0A075B5W3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-53A0A075B5W3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-53A0A075B5W3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-53A0A075B5W3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-53A0A075B5W3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-53A0A075B5W3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-53A0A075B5W3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.99■□□□□ 0.31
Ighv1-53A0A075B5W3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ighv1-53A0A075B5W3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-53A0A075B5W3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-53A0A075B5W3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-53A0A075B5W3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-53A0A075B5W3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-53A0A075B5W3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.98■□□□□ 0.31
Ighv1-53A0A075B5W3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-53A0A075B5W3 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.98■□□□□ 0.31
Ighv1-53A0A075B5W3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.97■□□□□ 0.31
Ighv1-53A0A075B5W3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-53A0A075B5W3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-53A0A075B5W3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ighv1-53A0A075B5W3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ighv1-53A0A075B5W3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-53A0A075B5W3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-53A0A075B5W3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ighv1-53A0A075B5W3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.96■□□□□ 0.31
Ighv1-53A0A075B5W3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-53A0A075B5W3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-53A0A075B5W3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms