Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv4-90A0A075B5L3 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.54■□□□□ 0.4
Igkv4-90A0A075B5L3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv4-90A0A075B5L3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Igkv4-90A0A075B5L3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv4-90A0A075B5L3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-90A0A075B5L3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv4-90A0A075B5L3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.52■□□□□ 0.4
Igkv4-90A0A075B5L3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Igkv4-90A0A075B5L3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-90A0A075B5L3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv4-90A0A075B5L3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Igkv4-90A0A075B5L3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-90A0A075B5L3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-90A0A075B5L3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-90A0A075B5L3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv4-90A0A075B5L3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-90A0A075B5L3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-90A0A075B5L3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-90A0A075B5L3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-90A0A075B5L3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv4-90A0A075B5L3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv4-90A0A075B5L3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv4-90A0A075B5L3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv4-90A0A075B5L3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Igkv4-90A0A075B5L3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv4-90A0A075B5L3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv4-90A0A075B5L3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Igkv4-90A0A075B5L3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Igkv4-90A0A075B5L3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv4-90A0A075B5L3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv4-90A0A075B5L3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Igkv4-90A0A075B5L3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.46■□□□□ 0.39
Igkv4-90A0A075B5L3 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.46■□□□□ 0.39
Igkv4-90A0A075B5L3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm7432-201ENSMUST00000210343 879 ntBASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv4-90A0A075B5L3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv4-90A0A075B5L3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv4-90A0A075B5L3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.44■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv4-90A0A075B5L3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.42■□□□□ 0.38
Igkv4-90A0A075B5L3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv4-90A0A075B5L3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv4-90A0A075B5L3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm11599-201ENSMUST00000118720 878 ntBASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv4-90A0A075B5L3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Igkv4-90A0A075B5L3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Gm4799-201ENSMUST00000095396 657 ntBASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Igkv4-90A0A075B5L3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv4-90A0A075B5L3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms