Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 CHCHD2P8-201ENST00000429873 447 ntBASIC16.91■□□□□ 0.3
LRFN1Q9P244 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 RNF126P1-202ENST00000569893 925 ntBASIC16.91■□□□□ 0.3
LRFN1Q9P244 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRFN1Q9P244 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRFN1Q9P244 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 Z83836.1-201ENST00000624605 1642 ntBASIC16.9■□□□□ 0.3
LRFN1Q9P244 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 DUSP5P1-201ENST00000441325 1139 ntBASIC16.9■□□□□ 0.3
LRFN1Q9P244 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 KRT18P41-201ENST00000518924 1277 ntBASIC16.9■□□□□ 0.3
LRFN1Q9P244 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.9■□□□□ 0.3
LRFN1Q9P244 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRFN1Q9P244 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
LRFN1Q9P244 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 MIR3652-201ENST00000579335 131 ntBASIC16.89■□□□□ 0.29
LRFN1Q9P244 AP002414.4-201ENST00000589764 1148 ntBASIC16.89■□□□□ 0.29
LRFN1Q9P244 AC005332.3-201ENST00000589904 676 ntBASIC16.89■□□□□ 0.29
LRFN1Q9P244 AC024563.2-201ENST00000603282 481 ntBASIC16.89■□□□□ 0.29
LRFN1Q9P244 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRFN1Q9P244 KRT18P1-202ENST00000452408 1331 ntBASIC16.89■□□□□ 0.29
LRFN1Q9P244 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRFN1Q9P244 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRFN1Q9P244 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRFN1Q9P244 AL163051.1-201ENST00000569214 1512 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms