Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TP73-AS1-210ENST00000637775 1455 ntBASIC20.11■□□□□ 0.81
HIPK3Q9H422 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 RPS2P28-201ENST00000314255 741 ntBASIC20.11■□□□□ 0.81
HIPK3Q9H422 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 HNRNPDP1-201ENST00000439535 754 ntBASIC20.11■□□□□ 0.81
HIPK3Q9H422 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 AC116407.3-201ENST00000623905 1129 ntBASIC20.11■□□□□ 0.81
HIPK3Q9H422 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK3Q9H422 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK3Q9H422 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 AL163051.1-201ENST00000569214 1512 ntBASIC20.1■□□□□ 0.81
HIPK3Q9H422 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK3Q9H422 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.1■□□□□ 0.81
HIPK3Q9H422 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.09■□□□□ 0.81
HIPK3Q9H422 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 AC005336.2-201ENST00000593183 939 ntBASIC20.09■□□□□ 0.81
HIPK3Q9H422 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIPK3Q9H422 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HIPK3Q9H422 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 AC005104.2-201ENST00000427818 678 ntBASIC20.08■□□□□ 0.81
HIPK3Q9H422 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIPK3Q9H422 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HIPK3Q9H422 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HIPK3Q9H422 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIPK3Q9H422 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIPK3Q9H422 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HIPK3Q9H422 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HIPK3Q9H422 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIPK3Q9H422 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HIPK3Q9H422 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms