Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHDQ96IW2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.57■□□□□ 0.56
SHDQ96IW2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.57■□□□□ 0.56
SHDQ96IW2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHDQ96IW2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHDQ96IW2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHDQ96IW2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHDQ96IW2 LINC01521-201ENST00000504184 1943 ntBASIC18.57■□□□□ 0.56
SHDQ96IW2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
SHDQ96IW2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 AL357033.4-201ENST00000617703 1807 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.56■□□□□ 0.56
SHDQ96IW2 RPSAP43-201ENST00000402237 625 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.56■□□□□ 0.56
SHDQ96IW2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.56■□□□□ 0.56
SHDQ96IW2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.56■□□□□ 0.56
SHDQ96IW2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
SHDQ96IW2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.56■□□□□ 0.56
SHDQ96IW2 OR7E14P-202ENST00000530490 1290 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 AC040169.1-201ENST00000565382 521 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.56■□□□□ 0.56
SHDQ96IW2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SHDQ96IW2 AC010327.4-202ENST00000591484 748 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 AP001160.2-201ENST00000596071 487 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 AL355385.1-201ENST00000606123 409 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 Z83851.2-201ENST00000609564 659 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.56■□□□□ 0.56
SHDQ96IW2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 AC092667.1-201ENST00000434301 2586 ntBASIC18.56■□□□□ 0.56
SHDQ96IW2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SHDQ96IW2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHDQ96IW2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SHDQ96IW2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
SHDQ96IW2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHDQ96IW2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SHDQ96IW2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.55■□□□□ 0.56
SHDQ96IW2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.55■□□□□ 0.56
SHDQ96IW2 GPX1P2-201ENST00000429271 606 ntBASIC18.55■□□□□ 0.56
SHDQ96IW2 RPS2P1-201ENST00000434010 821 ntBASIC18.55■□□□□ 0.56
SHDQ96IW2 HMGN1P19-201ENST00000436976 333 ntBASIC18.55■□□□□ 0.56
SHDQ96IW2 ABCD1P5-201ENST00000445663 754 ntBASIC18.55■□□□□ 0.56
SHDQ96IW2 AC092910.1-201ENST00000482027 1129 ntBASIC18.55■□□□□ 0.56
SHDQ96IW2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.55■□□□□ 0.56
SHDQ96IW2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SHDQ96IW2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.55■□□□□ 0.56
SHDQ96IW2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SHDQ96IW2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHDQ96IW2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
SHDQ96IW2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHDQ96IW2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHDQ96IW2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.54■□□□□ 0.56
SHDQ96IW2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHDQ96IW2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.54■□□□□ 0.56
SHDQ96IW2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 MIR149-201ENST00000384879 89 ntBASIC18.54■□□□□ 0.56
SHDQ96IW2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.54■□□□□ 0.56
SHDQ96IW2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.54■□□□□ 0.56
SHDQ96IW2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.54■□□□□ 0.56
SHDQ96IW2 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.54■□□□□ 0.56
SHDQ96IW2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.54■□□□□ 0.56
SHDQ96IW2 AC034105.1-201ENST00000563488 319 ntBASIC18.54■□□□□ 0.56
SHDQ96IW2 AC011467.2-201ENST00000598425 242 ntBASIC18.54■□□□□ 0.56
SHDQ96IW2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SHDQ96IW2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.54■□□□□ 0.56
SHDQ96IW2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHDQ96IW2 AL356309.3-201ENST00000624132 1934 ntBASIC18.54■□□□□ 0.56
SHDQ96IW2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHDQ96IW2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHDQ96IW2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.54■□□□□ 0.56
SHDQ96IW2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms