Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 MIR1233-2-201ENST00000408138 82 ntBASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 MIR1233-1-201ENST00000408722 82 ntBASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 FP475955.4-201ENST00000623131 1990 ntBASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNRNP40Q96DI7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 KRT8P50-201ENST00000562022 1438 ntBASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 PMS2P7-201ENST00000506558 1336 ntBASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 RPL13AP23-201ENST00000480739 586 ntBASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 TERC-201ENST00000602385 541 ntBASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.55■□□□□ 0.24
SNRNP40Q96DI7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 MIR940-201ENST00000401276 94 ntBASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AC018712.1-201ENST00000455767 687 ntBASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AC139887.3-201ENST00000568585 713 ntBASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AL049840.3-201ENST00000602669 611 ntBASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNRNP40Q96DI7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 AC073648.2-201ENST00000510116 352 ntBASIC16.53■□□□□ 0.24
SNRNP40Q96DI7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms