Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdha11Q91Y19 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Gm11764-201ENSMUST00000120221 623 ntBASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Dancr-204ENSMUST00000132389 2347 ntBASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdha11Q91Y19 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha11Q91Y19 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha11Q91Y19 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdha11Q91Y19 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm27628-201ENSMUST00000184911 107 ntBASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha11Q91Y19 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha11Q91Y19 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Gm5364-201ENSMUST00000216789 889 ntBASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha11Q91Y19 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms