Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4cQ8VCD7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4cQ8VCD7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4cQ8VCD7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kdm4cQ8VCD7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.31■□□□□ 0.52
Kdm4cQ8VCD7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Kdm4cQ8VCD7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm10013-201ENSMUST00000106074 672 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm12134-201ENSMUST00000122109 520 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm8825-201ENSMUST00000182565 998 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm4518-201ENSMUST00000182638 718 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.29■□□□□ 0.52
Kdm4cQ8VCD7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm15794-201ENSMUST00000120182 631 ntBASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm5587-201ENSMUST00000206270 674 ntBASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.28■□□□□ 0.52
Kdm4cQ8VCD7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms