Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc58Q8R3Q6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Gm13168-201ENSMUST00000121771 632 ntBASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc58Q8R3Q6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Gm16061-201ENSMUST00000122167 857 ntBASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc58Q8R3Q6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms