Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Clrn1Q8K445 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm8655-201ENSMUST00000221159 852 ntBASIC14.7□□□□□ -0.06
Clrn1Q8K445 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Clrn1Q8K445 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.69□□□□□ -0.06
Clrn1Q8K445 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Gm43347-201ENSMUST00000200226 580 ntBASIC14.69□□□□□ -0.06
Clrn1Q8K445 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Gm18622-201ENSMUST00000219361 595 ntBASIC14.69□□□□□ -0.06
Clrn1Q8K445 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Clrn1Q8K445 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.68□□□□□ -0.06
Clrn1Q8K445 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.68□□□□□ -0.06
Clrn1Q8K445 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.68□□□□□ -0.06
Clrn1Q8K445 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Clrn1Q8K445 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms