Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gm22175-201ENSMUST00000175007 78 ntBASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chd4Q6PDQ2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd4Q6PDQ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.1■□□□□ 0.81
Chd4Q6PDQ2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd4Q6PDQ2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Gm28630-201ENSMUST00000187806 498 ntBASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Chd4Q6PDQ2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Gm11543-201ENSMUST00000120758 370 ntBASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd4Q6PDQ2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Chd4Q6PDQ2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms