Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn9aQ62205 Syt7-205ENSMUST00000224135 1557 ntBASIC18.14■□□□□ 0.49
Scn9aQ62205 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scn9aQ62205 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.14■□□□□ 0.49
Scn9aQ62205 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn9aQ62205 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gm25857-201ENSMUST00000082788 129 ntBASIC18.13■□□□□ 0.49
Scn9aQ62205 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Gm24694-201ENSMUST00000180054 110 ntBASIC18.13■□□□□ 0.49
Scn9aQ62205 Gm27663-201ENSMUST00000184839 110 ntBASIC18.13■□□□□ 0.49
Scn9aQ62205 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.13■□□□□ 0.49
Scn9aQ62205 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.13■□□□□ 0.49
Scn9aQ62205 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn9aQ62205 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn9aQ62205 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn9aQ62205 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn9aQ62205 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm27920-201ENSMUST00000183953 96 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn9aQ62205 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm27533-201ENSMUST00000183800 152 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm38225-201ENSMUST00000194001 393 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Gm18049-201ENSMUST00000208909 581 ntBASIC18.11■□□□□ 0.49
Scn9aQ62205 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn9aQ62205 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn9aQ62205 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Gm16026-204ENSMUST00000162652 683 ntBASIC18.1■□□□□ 0.49
Scn9aQ62205 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn9aQ62205 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn9aQ62205 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Scn9aQ62205 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.1■□□□□ 0.49
Scn9aQ62205 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn9aQ62205 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scn9aQ62205 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms