Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccbe1Q3MI99 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccbe1Q3MI99 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Gm44549-201ENSMUST00000208351 577 ntBASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccbe1Q3MI99 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccbe1Q3MI99 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccbe1Q3MI99 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Gm4974-201ENSMUST00000209974 875 ntBASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccbe1Q3MI99 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms