Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.86■□□□□ 0.61
Snai1Q02085 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Snai1Q02085 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snai1Q02085 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Snai1Q02085 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Snai1Q02085 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Snai1Q02085 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.85■□□□□ 0.61
Snai1Q02085 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.85■□□□□ 0.61
Snai1Q02085 Gm27437-201ENSMUST00000183429 107 ntBASIC18.85■□□□□ 0.61
Snai1Q02085 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.85■□□□□ 0.61
Snai1Q02085 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.85■□□□□ 0.61
Snai1Q02085 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Snai1Q02085 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Snai1Q02085 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snai1Q02085 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.84■□□□□ 0.61
Snai1Q02085 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.84■□□□□ 0.61
Snai1Q02085 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.84■□□□□ 0.61
Snai1Q02085 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.84■□□□□ 0.61
Snai1Q02085 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.84■□□□□ 0.61
Snai1Q02085 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snai1Q02085 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snai1Q02085 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snai1Q02085 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.83■□□□□ 0.61
Snai1Q02085 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.83■□□□□ 0.6
Snai1Q02085 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.83■□□□□ 0.6
Snai1Q02085 Gm15483-201ENSMUST00000120338 456 ntBASIC18.83■□□□□ 0.6
Snai1Q02085 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.83■□□□□ 0.6
Snai1Q02085 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.83■□□□□ 0.6
Snai1Q02085 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Snai1Q02085 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Snai1Q02085 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Snai1Q02085 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snai1Q02085 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Snai1Q02085 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Snai1Q02085 Gm18737-201ENSMUST00000173594 937 ntBASIC18.82■□□□□ 0.6
Snai1Q02085 Gm29541-201ENSMUST00000191351 678 ntBASIC18.82■□□□□ 0.6
Snai1Q02085 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snai1Q02085 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
Snai1Q02085 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snai1Q02085 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Snai1Q02085 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snai1Q02085 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snai1Q02085 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms