Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sh2d1aO88890 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Gm45328-201ENSMUST00000210942 917 ntBASIC11.04□□□□□ -0.64
Sh2d1aO88890 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.04□□□□□ -0.64
Sh2d1aO88890 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.04□□□□□ -0.64
Sh2d1aO88890 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh2d1aO88890 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sh2d1aO88890 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh2d1aO88890 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh2d1aO88890 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sh2d1aO88890 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.02□□□□□ -0.65
Sh2d1aO88890 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms