Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-5A0A075B6B9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trav6d-5A0A075B6B9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm26039-201ENSMUST00000158152 144 ntBASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm2274-201ENSMUST00000184539 609 ntBASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-5A0A075B6B9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-5A0A075B6B9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-5A0A075B6B9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms