Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.49□□□□□ -0.57
Trav16d-dv11A0A075B617 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16d-dv11A0A075B617 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav16d-dv11A0A075B617 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav16d-dv11A0A075B617 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav16d-dv11A0A075B617 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms