Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.26□□□□□ -0.29
Col13a1Q9R1N9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Gm5682-201ENSMUST00000173402 505 ntBASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Gm44492-201ENSMUST00000197012 141 ntBASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Gm45167-201ENSMUST00000208007 322 ntBASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col13a1Q9R1N9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Gm9172-201ENSMUST00000212092 954 ntBASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col13a1Q9R1N9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm27300-201ENSMUST00000184085 97 ntBASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Gm27335-201ENSMUST00000184758 97 ntBASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.23□□□□□ -0.29
Col13a1Q9R1N9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms