Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ap3s1Q9DCR2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Gm38027-201ENSMUST00000192315 235 ntBASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ap3s1Q9DCR2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Gm10849-201ENSMUST00000100397 618 ntBASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ap3s1Q9DCR2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms