Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Sybu-209ENSMUST00000228639 4113 ntBASIC14.8□□□□□ -0.04
Upk1aQ9D132 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.79□□□□□ -0.04
Upk1aQ9D132 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm21559-201ENSMUST00000220638 855 ntBASIC14.79□□□□□ -0.04
Upk1aQ9D132 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Gm8587-201ENSMUST00000076538 843 ntBASIC14.79□□□□□ -0.04
Upk1aQ9D132 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk1aQ9D132 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm10052-201ENSMUST00000168019 960 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm7729-201ENSMUST00000050143 801 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.78□□□□□ -0.04
Upk1aQ9D132 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk1aQ9D132 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.77□□□□□ -0.04
Upk1aQ9D132 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk1aQ9D132 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Upk1aQ9D132 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Gm27389-201ENSMUST00000183622 195 ntBASIC14.77□□□□□ -0.05
Upk1aQ9D132 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.77□□□□□ -0.05
Upk1aQ9D132 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms