Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm715-201ENSMUST00000117865 831 ntBASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpa1Q8VEE4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Gm27463-201ENSMUST00000183569 57 ntBASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpa1Q8VEE4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Gm7370-201ENSMUST00000219471 767 ntBASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpa1Q8VEE4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpa1Q8VEE4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms