Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn3bQ8BHK2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn3bQ8BHK2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn3bQ8BHK2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Scn3bQ8BHK2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn3bQ8BHK2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn3bQ8BHK2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn3bQ8BHK2 Gm27463-201ENSMUST00000183569 57 ntBASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn3bQ8BHK2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn3bQ8BHK2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms