Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Gm37055-201ENSMUST00000191866 133 ntBASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.22□□□□□ -0.29
Upk3bQ80YF6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.22□□□□□ -0.29
Upk3bQ80YF6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3bQ80YF6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Gm18959-201ENSMUST00000208954 655 ntBASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk3bQ80YF6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk3bQ80YF6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Gm13559-201ENSMUST00000120476 863 ntBASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Gm27011-201ENSMUST00000182352 972 ntBASIC13.2□□□□□ -0.3
Upk3bQ80YF6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk3bQ80YF6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk3bQ80YF6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms