Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Cgnl1Q6AW69 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cgnl1Q6AW69 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Gm14859-201ENSMUST00000117752 357 ntBASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cgnl1Q6AW69 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Gm4459-201ENSMUST00000118750 468 ntBASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Gm8344-201ENSMUST00000119813 856 ntBASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Gm18622-201ENSMUST00000219361 595 ntBASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cgnl1Q6AW69 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cgnl1Q6AW69 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cgnl1Q6AW69 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cgnl1Q6AW69 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cgnl1Q6AW69 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cgnl1Q6AW69 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cgnl1Q6AW69 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cgnl1Q6AW69 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms