Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Timp3P39876 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Timp3P39876 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Timp3P39876 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.78□□□□□ -0.36
Timp3P39876 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.78□□□□□ -0.36
Timp3P39876 Gm18206-201ENSMUST00000207027 926 ntBASIC12.78□□□□□ -0.36
Timp3P39876 Gm8655-201ENSMUST00000221159 852 ntBASIC12.78□□□□□ -0.36
Timp3P39876 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Timp3P39876 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.78□□□□□ -0.36
Timp3P39876 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Timp3P39876 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Timp3P39876 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Timp3P39876 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Timp3P39876 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Timp3P39876 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Timp3P39876 Gm25406-201ENSMUST00000157599 105 ntBASIC12.77□□□□□ -0.37
Timp3P39876 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.77□□□□□ -0.37
Timp3P39876 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.77□□□□□ -0.37
Timp3P39876 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Timp3P39876 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.77□□□□□ -0.37
Timp3P39876 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Timp3P39876 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Timp3P39876 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.77□□□□□ -0.37
Timp3P39876 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Timp3P39876 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Timp3P39876 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Timp3P39876 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Timp3P39876 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Timp3P39876 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Timp3P39876 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Timp3P39876 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Gm25990-201ENSMUST00000102440 86 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.76□□□□□ -0.37
Timp3P39876 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Gm7230-201ENSMUST00000173026 815 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Mir5131-201ENSMUST00000175426 93 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.76□□□□□ -0.37
Timp3P39876 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.76□□□□□ -0.37
Timp3P39876 Gm7506-201ENSMUST00000207758 815 ntBASIC12.76□□□□□ -0.37
Timp3P39876 AW822252-206ENSMUST00000208904 237 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Timp3P39876 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.76□□□□□ -0.37
Timp3P39876 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Timp3P39876 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Timp3P39876 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms