Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.54■□□□□ 0.4
Col2a1P28481 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.54■□□□□ 0.4
Col2a1P28481 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.54■□□□□ 0.4
Col2a1P28481 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col2a1P28481 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col2a1P28481 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col2a1P28481 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.54■□□□□ 0.4
Col2a1P28481 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col2a1P28481 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.54■□□□□ 0.4
Col2a1P28481 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col2a1P28481 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.53■□□□□ 0.4
Col2a1P28481 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Gm18737-201ENSMUST00000173594 937 ntBASIC17.53■□□□□ 0.4
Col2a1P28481 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.53■□□□□ 0.4
Col2a1P28481 Mir6956-201ENSMUST00000183598 62 ntBASIC17.53■□□□□ 0.4
Col2a1P28481 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.53■□□□□ 0.4
Col2a1P28481 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col2a1P28481 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col2a1P28481 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col2a1P28481 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col2a1P28481 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col2a1P28481 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Col2a1P28481 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.52■□□□□ 0.4
Col2a1P28481 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.52■□□□□ 0.4
Col2a1P28481 Gm25948-201ENSMUST00000175334 112 ntBASIC17.52■□□□□ 0.4
Col2a1P28481 Gm10253-201ENSMUST00000194270 940 ntBASIC17.52■□□□□ 0.4
Col2a1P28481 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.52■□□□□ 0.4
Col2a1P28481 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.52■□□□□ 0.4
Col2a1P28481 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col2a1P28481 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Col2a1P28481 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Col2a1P28481 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col2a1P28481 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col2a1P28481 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Mir449b-201ENSMUST00000104833 80 ntBASIC17.51■□□□□ 0.39
Col2a1P28481 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.51■□□□□ 0.39
Col2a1P28481 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col2a1P28481 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Col2a1P28481 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col2a1P28481 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.51■□□□□ 0.39
Col2a1P28481 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.51■□□□□ 0.39
Col2a1P28481 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col2a1P28481 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col2a1P28481 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col2a1P28481 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col2a1P28481 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col2a1P28481 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.5■□□□□ 0.39
Col2a1P28481 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col2a1P28481 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.5■□□□□ 0.39
Col2a1P28481 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col2a1P28481 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.5■□□□□ 0.39
Col2a1P28481 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Col2a1P28481 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.5■□□□□ 0.39
Col2a1P28481 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col2a1P28481 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Col2a1P28481 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
Col2a1P28481 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms