Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.02□□□□□ -0.33
Col8a2P25318 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col8a2P25318 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col8a2P25318 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col8a2P25318 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.01□□□□□ -0.33
Col8a2P25318 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col8a2P25318 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col8a2P25318 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.01□□□□□ -0.33
Col8a2P25318 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.01□□□□□ -0.33
Col8a2P25318 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.01□□□□□ -0.33
Col8a2P25318 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.01□□□□□ -0.33
Col8a2P25318 Psmb5-202ENSMUST00000227257 622 ntBASIC13.01□□□□□ -0.33
Col8a2P25318 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col8a2P25318 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col8a2P25318 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.01□□□□□ -0.33
Col8a2P25318 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col8a2P25318 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Col8a2P25318 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col8a2P25318 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13□□□□□ -0.33
Col8a2P25318 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13□□□□□ -0.33
Col8a2P25318 Gm11185-201ENSMUST00000117732 1007 ntBASIC13□□□□□ -0.33
Col8a2P25318 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13□□□□□ -0.33
Col8a2P25318 Gm2308-201ENSMUST00000166539 1004 ntBASIC13□□□□□ -0.33
Col8a2P25318 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Col8a2P25318 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13□□□□□ -0.33
Col8a2P25318 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col8a2P25318 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col8a2P25318 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col8a2P25318 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col8a2P25318 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.99□□□□□ -0.33
Col8a2P25318 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 Gm7222-201ENSMUST00000117512 906 ntBASIC12.99□□□□□ -0.33
Col8a2P25318 Gm15358-201ENSMUST00000119249 520 ntBASIC12.99□□□□□ -0.33
Col8a2P25318 Gm12260-201ENSMUST00000122447 411 ntBASIC12.99□□□□□ -0.33
Col8a2P25318 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col8a2P25318 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.99□□□□□ -0.33
Col8a2P25318 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.99□□□□□ -0.33
Col8a2P25318 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms