Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Gm12134-201ENSMUST00000122109 520 ntBASIC14.81□□□□□ -0.04
Krt1P04104 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Krt1P04104 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Krt1P04104 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Krt1P04104 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt1P04104 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt1P04104 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt1P04104 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt1P04104 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt1P04104 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Krt1P04104 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt1P04104 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt1P04104 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Krt1P04104 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt1P04104 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Krt1P04104 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt1P04104 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.79□□□□□ -0.04
Krt1P04104 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.79□□□□□ -0.04
Krt1P04104 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Gm27405-201ENSMUST00000184201 112 ntBASIC14.79□□□□□ -0.04
Krt1P04104 Gm38027-201ENSMUST00000192315 235 ntBASIC14.79□□□□□ -0.04
Krt1P04104 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.79□□□□□ -0.04
Krt1P04104 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.79□□□□□ -0.04
Krt1P04104 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Krt1P04104 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Krt1P04104 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt1P04104 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt1P04104 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Krt1P04104 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Gm12085-201ENSMUST00000119263 940 ntBASIC14.78□□□□□ -0.04
Krt1P04104 Gm18666-201ENSMUST00000190039 958 ntBASIC14.78□□□□□ -0.04
Krt1P04104 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Krt1P04104 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt1P04104 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms