Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.05□□□□□ -0.32
CfdP03953 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.05□□□□□ -0.32
CfdP03953 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.05□□□□□ -0.32
CfdP03953 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.05□□□□□ -0.32
CfdP03953 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CfdP03953 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CfdP03953 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.05□□□□□ -0.32
CfdP03953 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.04□□□□□ -0.32
CfdP03953 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
CfdP03953 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.04□□□□□ -0.32
CfdP03953 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.04□□□□□ -0.32
CfdP03953 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CfdP03953 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.04□□□□□ -0.32
CfdP03953 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CfdP03953 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CfdP03953 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CfdP03953 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.03□□□□□ -0.32
CfdP03953 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CfdP03953 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CfdP03953 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.03□□□□□ -0.32
CfdP03953 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.03□□□□□ -0.32
CfdP03953 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Gm27463-201ENSMUST00000183569 57 ntBASIC13.03□□□□□ -0.32
CfdP03953 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.03□□□□□ -0.32
CfdP03953 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.03□□□□□ -0.32
CfdP03953 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CfdP03953 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CfdP03953 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CfdP03953 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CfdP03953 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CfdP03953 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
CfdP03953 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CfdP03953 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CfdP03953 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms