Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.04■□□□□ 0.8
Ubr1O70481 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.04■□□□□ 0.8
Ubr1O70481 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Ubr1O70481 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.04■□□□□ 0.8
Ubr1O70481 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.04■□□□□ 0.8
Ubr1O70481 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.04■□□□□ 0.8
Ubr1O70481 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Ubr1O70481 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ubr1O70481 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr1O70481 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Ubr1O70481 Gm28630-201ENSMUST00000187806 498 ntBASIC20.03■□□□□ 0.8
Ubr1O70481 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.03■□□□□ 0.8
Ubr1O70481 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ubr1O70481 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ubr1O70481 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr1O70481 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ubr1O70481 Gm6415-201ENSMUST00000118488 348 ntBASIC20.03■□□□□ 0.8
Ubr1O70481 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ubr1O70481 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ubr1O70481 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.02■□□□□ 0.8
Ubr1O70481 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ubr1O70481 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.02■□□□□ 0.8
Ubr1O70481 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Ubr1O70481 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ubr1O70481 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.02■□□□□ 0.8
Ubr1O70481 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.02■□□□□ 0.8
Ubr1O70481 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ubr1O70481 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr1O70481 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr1O70481 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr1O70481 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr1O70481 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ubr1O70481 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.01■□□□□ 0.79
Ubr1O70481 Gm18737-201ENSMUST00000173594 937 ntBASIC20.01■□□□□ 0.79
Ubr1O70481 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.01■□□□□ 0.79
Ubr1O70481 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr1O70481 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20■□□□□ 0.79
Ubr1O70481 Gm43767-201ENSMUST00000198933 381 ntBASIC20■□□□□ 0.79
Ubr1O70481 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ubr1O70481 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20■□□□□ 0.79
Ubr1O70481 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Ubr1O70481 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Ubr1O70481 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr1O70481 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr1O70481 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms