Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Matn3O35701 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Matn3O35701 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.21□□□□□ -0.13
Matn3O35701 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Matn3O35701 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.21□□□□□ -0.13
Matn3O35701 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Gm15565-201ENSMUST00000118890 427 ntBASIC14.21□□□□□ -0.13
Matn3O35701 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.21□□□□□ -0.13
Matn3O35701 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.21□□□□□ -0.13
Matn3O35701 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.21□□□□□ -0.13
Matn3O35701 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.21□□□□□ -0.13
Matn3O35701 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.21□□□□□ -0.13
Matn3O35701 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Matn3O35701 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.21□□□□□ -0.13
Matn3O35701 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Matn3O35701 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.21□□□□□ -0.14
Matn3O35701 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Matn3O35701 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Matn3O35701 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Matn3O35701 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.2□□□□□ -0.14
Matn3O35701 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.2□□□□□ -0.14
Matn3O35701 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Matn3O35701 Gm44450-201ENSMUST00000199528 114 ntBASIC14.2□□□□□ -0.14
Matn3O35701 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Matn3O35701 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.2□□□□□ -0.14
Matn3O35701 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Matn3O35701 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Matn3O35701 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn3O35701 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.19□□□□□ -0.14
Matn3O35701 Gm12085-201ENSMUST00000119263 940 ntBASIC14.19□□□□□ -0.14
Matn3O35701 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn3O35701 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.19□□□□□ -0.14
Matn3O35701 Gm18115-201ENSMUST00000221209 621 ntBASIC14.19□□□□□ -0.14
Matn3O35701 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn3O35701 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn3O35701 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Matn3O35701 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Matn3O35701 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.19□□□□□ -0.14
Matn3O35701 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Matn3O35701 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Matn3O35701 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.19□□□□□ -0.14
Matn3O35701 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms