Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.72■□□□□ 0.59
NpcdF8VQB8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NpcdF8VQB8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.71■□□□□ 0.59
NpcdF8VQB8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NpcdF8VQB8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NpcdF8VQB8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NpcdF8VQB8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.69■□□□□ 0.58
NpcdF8VQB8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Mir8102-201ENSMUST00000184148 139 ntBASIC18.69■□□□□ 0.58
NpcdF8VQB8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NpcdF8VQB8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NpcdF8VQB8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Gm13216-201ENSMUST00000117145 591 ntBASIC18.67■□□□□ 0.58
NpcdF8VQB8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Gm19164-201ENSMUST00000210667 640 ntBASIC18.67■□□□□ 0.58
NpcdF8VQB8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms