Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm12887B1AVM1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Gm29707-201ENSMUST00000196325 491 ntBASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.65□□□□□ -0.38
Gm12887B1AVM1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm12887B1AVM1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm12887B1AVM1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm12887B1AVM1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms