Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Gm3880A0A1B0GSB3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Gm3880A0A1B0GSB3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Gm3880A0A1B0GSB3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Gm3880A0A1B0GSB3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Gm3880A0A1B0GSB3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Gm26971-201ENSMUST00000182423 1072 ntBASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 Gm27032-201ENSMUST00000183124 1116 ntBASIC7.69□□□□□ -1.18
Gm3880A0A1B0GSB3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms