Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc194A0A140LIT1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc194A0A140LIT1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Gm23634-201ENSMUST00000175071 91 ntBASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Gm29518-201ENSMUST00000190858 372 ntBASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccdc194A0A140LIT1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc194A0A140LIT1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc194A0A140LIT1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc194A0A140LIT1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc194A0A140LIT1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc194A0A140LIT1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms